Antagonistic endophytic bacteria associated with nodules of soybean (Glycine max L.) and plant growth-promoting properties.
Identifieur interne : 000615 ( Main/Exploration ); précédent : 000614; suivant : 000616Antagonistic endophytic bacteria associated with nodules of soybean (Glycine max L.) and plant growth-promoting properties.
Auteurs : Longfei Zhao [République populaire de Chine] ; Yajun Xu [République populaire de Chine] ; Xinhe Lai [République populaire de Chine]Source :
- Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] [ 1678-4405 ]
Descripteurs français
- KwdFr :
- ADN ribosomique (composition chimique), ADN ribosomique (génétique), ARN ribosomique 16S (génétique), Analyse de regroupements (MeSH), Analyse de séquence d'ADN (MeSH), Antibiose (MeSH), Bactéries (classification), Bactéries (isolement et purification), Bactéries (métabolisme), Chine (MeSH), Endophytes (classification), Endophytes (isolement et purification), Endophytes (métabolisme), Facteur de croissance végétal (métabolisme), Nodules racinaires de plante (microbiologie), Phylogenèse (MeSH), Phytophthora (croissance et développement), Phytophthora (cytologie), Phytophthora (effets des médicaments et des substances chimiques), Soja (croissance et développement), Soja (microbiologie).
- MESH :
- composition chimique : ADN ribosomique, Bactéries, Endophytes.
- croissance et développement : Phytophthora, Soja.
- cytologie : Phytophthora.
- effets des médicaments et des substances chimiques : Phytophthora.
- génétique : ADN ribosomique, ARN ribosomique 16S.
- isolement et purification : Bactéries, Endophytes.
- microbiologie : Nodules racinaires de plante, Soja.
- métabolisme : Bactéries, Endophytes, Facteur de croissance végétal.
- Analyse de regroupements, Analyse de séquence d'ADN, Antibiose, Chine, Phylogenèse.
English descriptors
- KwdEn :
- Antibiosis (MeSH), Bacteria (classification), Bacteria (isolation & purification), Bacteria (metabolism), China (MeSH), Cluster Analysis (MeSH), DNA, Ribosomal (chemistry), DNA, Ribosomal (genetics), Endophytes (classification), Endophytes (isolation & purification), Endophytes (metabolism), Phylogeny (MeSH), Phytophthora (cytology), Phytophthora (drug effects), Phytophthora (growth & development), Plant Growth Regulators (metabolism), RNA, Ribosomal, 16S (genetics), Root Nodules, Plant (microbiology), Sequence Analysis, DNA (MeSH), Soybeans (growth & development), Soybeans (microbiology).
- MESH :
- chemical , chemistry : DNA, Ribosomal.
- classification : Bacteria, Endophytes.
- cytology : Phytophthora.
- drug effects : Phytophthora.
- chemical , genetics : DNA, Ribosomal, RNA, Ribosomal, 16S.
- growth & development : Phytophthora, Soybeans.
- isolation & purification : Bacteria, Endophytes.
- metabolism : Bacteria, Endophytes, Plant Growth Regulators.
- microbiology : Root Nodules, Plant, Soybeans.
- Antibiosis, China, Cluster Analysis, Phylogeny, Sequence Analysis, DNA.
Abstract
A total of 276 endophytic bacteria were isolated from the root nodules of soybean (Glycine max L.) grown in 14 sites in Henan Province, China. The inhibitory activity of these bacteria against pathogenic fungus Phytophthora sojae 01 was screened in vitro. Six strains with more than 63% inhibitory activities were further characterized through optical epifluorescence microscopic observation, sequencing, and phylogenetic analysis of 16S rRNA gene, potential plant growth-promoting properties analysis, and plant inoculation assay. On the basis of the phylogeny of 16S rRNA genes, the six endophytic antagonists were identified as belonging to five genera: Enterobacter, Acinetobacter, Pseudomonas, Ochrobactrum, and Bacillus. The strain Acinetobacter calcoaceticus DD161 had the strongest inhibitory activity (71.14%) against the P. sojae 01, which caused morphological abnormal changes of fungal mycelia; such changes include fracture, lysis, formation of a protoplast ball at the end of hyphae, and split ends. Except for Ochrobactrum haematophilum DD234, other antagonistic strains showed the capacity to produce siderophore, indole acetic acid, and nitrogen fixation activity. Regression analysis suggested a significant positive correlation between siderophore production and inhibition ratio against P. sojae 01. This study demonstrated that nodule endophytic bacteria are important resources for searching for inhibitors specific to the fungi and for promoting effects for soybean seedlings.
DOI: 10.1016/j.bjm.2017.06.007
PubMed: 29117917
PubMed Central: PMC5914205
Affiliations:
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Analysis</term><term>Phylogeny</term><term>Sequence Analysis, DNA</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de regroupements</term><term>Analyse de séquence d'ADN</term><term>Antibiose</term><term>Chine</term><term>Phylogenèse</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">A total of 276 endophytic bacteria were isolated from the root nodules of soybean (Glycine max L.) grown in 14 sites in Henan Province, China. The inhibitory activity of these bacteria against pathogenic fungus Phytophthora sojae 01 was screened in vitro. Six strains with more than 63% inhibitory activities were further characterized through optical epifluorescence microscopic observation, sequencing, and phylogenetic analysis of 16S rRNA gene, potential plant growth-promoting properties analysis, and plant inoculation assay. On the basis of the phylogeny of 16S rRNA genes, the six endophytic antagonists were identified as belonging to five genera: Enterobacter, Acinetobacter, Pseudomonas, Ochrobactrum, and Bacillus. The strain Acinetobacter calcoaceticus DD161 had the strongest inhibitory activity (71.14%) against the P. sojae 01, which caused morphological abnormal changes of fungal mycelia; such changes include fracture, lysis, formation of a protoplast ball at the end of hyphae, and split ends. Except for Ochrobactrum haematophilum DD234, other antagonistic strains showed the capacity to produce siderophore, indole acetic acid, and nitrogen fixation activity. Regression analysis suggested a significant positive correlation between siderophore production and inhibition ratio against P. sojae 01. This study demonstrated that nodule endophytic bacteria are important resources for searching for inhibitors specific to the fungi and for promoting effects for soybean seedlings.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">29117917</PMID><DateCompleted><Year>2018</Year><Month>08</Month><Day>24</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1678-4405</ISSN><JournalIssue CitedMedium="Internet"><Volume>49</Volume><Issue>2</Issue><PubDate><MedlineDate>2018 Apr - Jun</MedlineDate></PubDate></JournalIssue><Title>Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]</Title><ISOAbbreviation>Braz J Microbiol</ISOAbbreviation></Journal><ArticleTitle>Antagonistic endophytic bacteria associated with nodules of soybean (Glycine max L.) and plant growth-promoting properties.</ArticleTitle><Pagination><MedlinePgn>269-278</MedlinePgn></Pagination><ELocationID EIdType="pii" ValidYN="Y">S1517-8382(17)30007-2</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.bjm.2017.06.007</ELocationID><Abstract><AbstractText>A total of 276 endophytic bacteria were isolated from the root nodules of soybean (Glycine max L.) grown in 14 sites in Henan Province, China. The inhibitory activity of these bacteria against pathogenic fungus Phytophthora sojae 01 was screened in vitro. Six strains with more than 63% inhibitory activities were further characterized through optical epifluorescence microscopic observation, sequencing, and phylogenetic analysis of 16S rRNA gene, potential plant growth-promoting properties analysis, and plant inoculation assay. On the basis of the phylogeny of 16S rRNA genes, the six endophytic antagonists were identified as belonging to five genera: Enterobacter, Acinetobacter, Pseudomonas, Ochrobactrum, and Bacillus. The strain Acinetobacter calcoaceticus DD161 had the strongest inhibitory activity (71.14%) against the P. sojae 01, which caused morphological abnormal changes of fungal mycelia; such changes include fracture, lysis, formation of a protoplast ball at the end of hyphae, and split ends. Except for Ochrobactrum haematophilum DD234, other antagonistic strains showed the capacity to produce siderophore, indole acetic acid, and nitrogen fixation activity. Regression analysis suggested a significant positive correlation between siderophore production and inhibition ratio against P. sojae 01. This study demonstrated that nodule endophytic bacteria are important resources for searching for inhibitors specific to the fungi and for promoting effects for soybean seedlings.</AbstractText><CopyrightInformation>Copyright © 2017 Sociedade Brasileira de Microbiologia. Published by Elsevier Editora Ltda. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Zhao</LastName><ForeName>LongFei</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Shangqiu Normal University, College of Life Sciences, Key Laboratory of Plant-Microbe Interactions of Henan, Shangqiu, Henan, PR China. Electronic address: hnzhaolongfei@163.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Xu</LastName><ForeName>YaJun</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Shangqiu Normal University, College of Life Sciences, Key Laboratory of Plant-Microbe Interactions of Henan, Shangqiu, Henan, PR China.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Lai</LastName><ForeName>XinHe</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>The First Affiliated Hospital of Wenzhou Medical University, Institute of Inflammation & Diseases, Wenzhou, China.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>10</Month><Day>13</Day></ArticleDate></Article><MedlineJournalInfo><Country>Brazil</Country><MedlineTA>Braz J Microbiol</MedlineTA><NlmUniqueID>101095924</NlmUniqueID><ISSNLinking>1517-8382</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004275">DNA, Ribosomal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D010937">Plant Growth Regulators</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D012336">RNA, Ribosomal, 16S</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000898" MajorTopicYN="Y">Antibiosis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D001419" MajorTopicYN="N">Bacteria</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002681" MajorTopicYN="N">China</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016000" MajorTopicYN="N">Cluster Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004275" MajorTopicYN="N">DNA, Ribosomal</DescriptorName><QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D060026" MajorTopicYN="N">Endophytes</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName><QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010838" MajorTopicYN="N">Phytophthora</DescriptorName><QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010937" MajorTopicYN="N">Plant Growth Regulators</DescriptorName><QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012336" MajorTopicYN="N">RNA, Ribosomal, 16S</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D053204" MajorTopicYN="N">Root Nodules, Plant</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D013025" MajorTopicYN="N">Soybeans</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Antagonisis</Keyword><Keyword MajorTopicYN="N">Endophytes</Keyword><Keyword MajorTopicYN="N">Phytophthora sojae</Keyword><Keyword MajorTopicYN="N">Plant growth-promoting potential</Keyword><Keyword MajorTopicYN="N">Soybean</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2017</Year><Month>01</Month><Day>05</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2017</Year><Month>06</Month><Day>07</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2017</Year><Month>06</Month><Day>19</Day></PubMedPubDate><PubMedPubDate 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